Isolation Forest Prediction Mechanics: Does it compare value with every tree (and the original training subset)? The 2019 Stack Overflow Developer Survey Results Are In Announcing the arrival of Valued Associate #679: Cesar Manara Planned maintenance scheduled April 17/18, 2019 at 00:00UTC (8:00pm US/Eastern) 2019 Moderator Election Q&A - Questionnaire 2019 Community Moderator Election ResultsPrediction in the training sample with randomforest in rHow to construct a Decision tree in R where the training data has a frequency associated with each classAutoencoder for anomaly detection from feature vectorsUsing GridSearchCV and a Random Forest Regressor with the same parameters gives different resultsHow to reduce the number of rules in decision tree with Support and ConfidenceGet Decision Tree Prediction With Random Forest

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Isolation Forest Prediction Mechanics: Does it compare value with every tree (and the original training subset)?



The 2019 Stack Overflow Developer Survey Results Are In
Announcing the arrival of Valued Associate #679: Cesar Manara
Planned maintenance scheduled April 17/18, 2019 at 00:00UTC (8:00pm US/Eastern)
2019 Moderator Election Q&A - Questionnaire
2019 Community Moderator Election ResultsPrediction in the training sample with randomforest in rHow to construct a Decision tree in R where the training data has a frequency associated with each classAutoencoder for anomaly detection from feature vectorsUsing GridSearchCV and a Random Forest Regressor with the same parameters gives different resultsHow to reduce the number of rules in decision tree with Support and ConfidenceGet Decision Tree Prediction With Random Forest










0












$begingroup$


So I understand the general idea of how isolation forests works, but I'm having trouble understanding how the model makes predictions on new data.



Does it pass every new point (separately) through every tree in the trained model, and then runs the exact same splits with the exact same original subset data (plus this single new point), to determine the number of steps (anomaly score) until this new point gets isolated?
Then this score gets compared back to the anomaly score threshold that was set when the model was trained?










share|improve this question









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bumped to the homepage by Community 43 mins ago


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  • $begingroup$
    What do you mean by original subset data? Only the trees are remembered from training
    $endgroup$
    – jonnor
    Jun 24 '18 at 11:45















0












$begingroup$


So I understand the general idea of how isolation forests works, but I'm having trouble understanding how the model makes predictions on new data.



Does it pass every new point (separately) through every tree in the trained model, and then runs the exact same splits with the exact same original subset data (plus this single new point), to determine the number of steps (anomaly score) until this new point gets isolated?
Then this score gets compared back to the anomaly score threshold that was set when the model was trained?










share|improve this question









$endgroup$




bumped to the homepage by Community 43 mins ago


This question has answers that may be good or bad; the system has marked it active so that they can be reviewed.














  • $begingroup$
    What do you mean by original subset data? Only the trees are remembered from training
    $endgroup$
    – jonnor
    Jun 24 '18 at 11:45













0












0








0





$begingroup$


So I understand the general idea of how isolation forests works, but I'm having trouble understanding how the model makes predictions on new data.



Does it pass every new point (separately) through every tree in the trained model, and then runs the exact same splits with the exact same original subset data (plus this single new point), to determine the number of steps (anomaly score) until this new point gets isolated?
Then this score gets compared back to the anomaly score threshold that was set when the model was trained?










share|improve this question









$endgroup$




So I understand the general idea of how isolation forests works, but I'm having trouble understanding how the model makes predictions on new data.



Does it pass every new point (separately) through every tree in the trained model, and then runs the exact same splits with the exact same original subset data (plus this single new point), to determine the number of steps (anomaly score) until this new point gets isolated?
Then this score gets compared back to the anomaly score threshold that was set when the model was trained?







random-forest decision-trees anomaly-detection






share|improve this question













share|improve this question











share|improve this question




share|improve this question










asked Mar 21 '18 at 22:41









Michael DuMichael Du

11




11





bumped to the homepage by Community 43 mins ago


This question has answers that may be good or bad; the system has marked it active so that they can be reviewed.







bumped to the homepage by Community 43 mins ago


This question has answers that may be good or bad; the system has marked it active so that they can be reviewed.













  • $begingroup$
    What do you mean by original subset data? Only the trees are remembered from training
    $endgroup$
    – jonnor
    Jun 24 '18 at 11:45
















  • $begingroup$
    What do you mean by original subset data? Only the trees are remembered from training
    $endgroup$
    – jonnor
    Jun 24 '18 at 11:45















$begingroup$
What do you mean by original subset data? Only the trees are remembered from training
$endgroup$
– jonnor
Jun 24 '18 at 11:45




$begingroup$
What do you mean by original subset data? Only the trees are remembered from training
$endgroup$
– jonnor
Jun 24 '18 at 11:45










2 Answers
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$begingroup$

You can find the sklearn implementation of Isolation Forest in Python at https://github.com/scikit-learn/scikit-learn/blob/a24c8b46/sklearn/ensemble/iforest.py#L229



It calculates the mean path depth needed to classify new samples. They are scored relatively to a theoretical average path length. Original training data is not used, only the learned trees.






share|improve this answer









$endgroup$




















    0












    $begingroup$

    Yes, it pass every new point (separately) through every tree in the trained model, and then runs the exact same splits with the exact same original subset data (plus this single new point), to determine the number of steps (anomaly score) until this new point gets isolated.
    Then it will average the path length computed from all the trees for that test instance and this would be the final anomaly score which is then normalized in the range 0-1.






    share|improve this answer









    $endgroup$













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      2 Answers
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      2 Answers
      2






      active

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      active

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      votes






      active

      oldest

      votes









      0












      $begingroup$

      You can find the sklearn implementation of Isolation Forest in Python at https://github.com/scikit-learn/scikit-learn/blob/a24c8b46/sklearn/ensemble/iforest.py#L229



      It calculates the mean path depth needed to classify new samples. They are scored relatively to a theoretical average path length. Original training data is not used, only the learned trees.






      share|improve this answer









      $endgroup$

















        0












        $begingroup$

        You can find the sklearn implementation of Isolation Forest in Python at https://github.com/scikit-learn/scikit-learn/blob/a24c8b46/sklearn/ensemble/iforest.py#L229



        It calculates the mean path depth needed to classify new samples. They are scored relatively to a theoretical average path length. Original training data is not used, only the learned trees.






        share|improve this answer









        $endgroup$















          0












          0








          0





          $begingroup$

          You can find the sklearn implementation of Isolation Forest in Python at https://github.com/scikit-learn/scikit-learn/blob/a24c8b46/sklearn/ensemble/iforest.py#L229



          It calculates the mean path depth needed to classify new samples. They are scored relatively to a theoretical average path length. Original training data is not used, only the learned trees.






          share|improve this answer









          $endgroup$



          You can find the sklearn implementation of Isolation Forest in Python at https://github.com/scikit-learn/scikit-learn/blob/a24c8b46/sklearn/ensemble/iforest.py#L229



          It calculates the mean path depth needed to classify new samples. They are scored relatively to a theoretical average path length. Original training data is not used, only the learned trees.







          share|improve this answer












          share|improve this answer



          share|improve this answer










          answered Jun 24 '18 at 11:52









          jonnorjonnor

          2726




          2726





















              0












              $begingroup$

              Yes, it pass every new point (separately) through every tree in the trained model, and then runs the exact same splits with the exact same original subset data (plus this single new point), to determine the number of steps (anomaly score) until this new point gets isolated.
              Then it will average the path length computed from all the trees for that test instance and this would be the final anomaly score which is then normalized in the range 0-1.






              share|improve this answer









              $endgroup$

















                0












                $begingroup$

                Yes, it pass every new point (separately) through every tree in the trained model, and then runs the exact same splits with the exact same original subset data (plus this single new point), to determine the number of steps (anomaly score) until this new point gets isolated.
                Then it will average the path length computed from all the trees for that test instance and this would be the final anomaly score which is then normalized in the range 0-1.






                share|improve this answer









                $endgroup$















                  0












                  0








                  0





                  $begingroup$

                  Yes, it pass every new point (separately) through every tree in the trained model, and then runs the exact same splits with the exact same original subset data (plus this single new point), to determine the number of steps (anomaly score) until this new point gets isolated.
                  Then it will average the path length computed from all the trees for that test instance and this would be the final anomaly score which is then normalized in the range 0-1.






                  share|improve this answer









                  $endgroup$



                  Yes, it pass every new point (separately) through every tree in the trained model, and then runs the exact same splits with the exact same original subset data (plus this single new point), to determine the number of steps (anomaly score) until this new point gets isolated.
                  Then it will average the path length computed from all the trees for that test instance and this would be the final anomaly score which is then normalized in the range 0-1.







                  share|improve this answer












                  share|improve this answer



                  share|improve this answer










                  answered Mar 13 at 18:30









                  ShivanyaShivanya

                  164




                  164



























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                      ValueError: Expected n_neighbors <= n_samples, but n_samples = 1, n_neighbors = 6 (SMOTE) The 2019 Stack Overflow Developer Survey Results Are InCan SMOTE be applied over sequence of words (sentences)?ValueError when doing validation with random forestsSMOTE and multi class oversamplingLogic behind SMOTE-NC?ValueError: Error when checking target: expected dense_1 to have shape (7,) but got array with shape (1,)SmoteBoost: Should SMOTE be ran individually for each iteration/tree in the boosting?solving multi-class imbalance classification using smote and OSSUsing SMOTE for Synthetic Data generation to improve performance on unbalanced dataproblem of entry format for a simple model in KerasSVM SMOTE fit_resample() function runs forever with no result